ALPACA (ALgorithms for PAngenome Computational Analysis) is an EU funded Innovative Training Network for talented PhD Students.
ALgorithms for PAngenome Computational Analysis is an EU funded Innovative Training Network
ALPACA (ALgorithms for PAngenome Computational Analysis) is an EU funded Innovative Training Network for talented PhD Students.
In view of ultra-large amounts of genome sequence data emerging from rapidly advancing genome sequencing devices the driving, urgent question is: How can we arrange and analyze these data masses in a formally rigorous, computationally efficient and biomedically rewarding manner?
Graph based data structures have been pointed out to have disruptive benefits over traditional sequence based structures when representing pan-genomes. This paradigm shift from sequences to graphs requires to make substantial advances in terms of algorithms and data structures.